No immobilizer and no can-bus?
From this guide: https://cdn.fortin.ca/download/24121/evo-one_ig_thr_bi_toy1-tc-4runner_2003-2011_b_24121.pdf
Connect the t-harness, the foot brake, the ground wire, and set option 20.2 - Tachless to ON in the settings. This will cover basic remote start. If you want to control eletric doors from an RF-KIT, those connections would also be required.
Since there is no immobilizer and no CAN-BUs, the unit does not need to be programmed to the car. Basic standard remote start connections are all that is needed.
I assume that you also puschased an RF-KIT? This is the only thing that needs to be programmed to the EVO-ONE. 3x lock start is not available on vehicles without CAN-BUS.